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Theses/Dissertations from 2011

Establishment, Growth and Regeneration of Zebrafish Fins, Shu Tu

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Targeting and activity of the AAA+ ATPase torsinA within the endoplasmic reticulum, Abigail Vander Heyden

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Suprachiasmatic nuclei development: A characterization of transcription factors and the influence of retinal innervation and VIP signaling, Cassandra VanDunk

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Development Of Thymic Natural Killer Cells From Double Negative 1 Thymocyte Precursors, Claudia Vargas

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The Role of Schwann Cell Mitochondrial Metabolism in Schwann Cell Biology and Axonal Survival, Andreu Viader

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Opposing Crosstalk between Rho1 and Cdc42 in Epithelial Morphogenesis, Steve Warner

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Role of the ARF Tumor Suppressor in Osteoclasts, Crystal Winkeler

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The Gut Microbiome In Healthy And Severely Malnourished Humans, Tanya Yatsunenko

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Specific Roles Of Macaque Parietal Regions In Making Saccades And Reaches, Eric Yttri

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The Role of Fas with Fas Ligand Interaction in Herpetci Stromal Keratitis (HSK), Hamideh Zakeri

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Quantitative Analysis Demonstrates Most Transcription Factors Require only Simple Models of Specificity, Yue Zhao

Theses/Dissertations from 2010

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Regulation of peripheral nerve regeneration by the mTOR pathway, Namiko Abe

Elucidating the Trafficking and Function of the Class III Glucose Transporters GLUT8 and GLUT12, Lauren Blair Vlaich Aerni-Flessner

Entry, Capture and Presentation of Blood-Borne Antigens and Effects of TCR Ligand Density on Negative Selection and Treg Induction of CD4SP Thymocytes, Danielle Françoise Atibalentja

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Impact of Second Messenger Modulation on Activity-Dependent and Basal Properties of Excitatory Synapses, Chun Yun Chang

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Regulation of Human T-cell Leukemia Virus Type 1 Infection and Replication, Gunjan Choudhary

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The Hematopoietic Compartment Regulates Osteoblast Differentiation And Apoptosis During Cytokine Treatment, Matthew Christopher

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Role of the Ajuba LIM Proteins in Epithelial Growth Regulation, Meghna Das Thakur

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P38 Phoshporylates RB On SER567 By A Novel, Cell Cycle-Independent Mechanism That Triggers RB-HDM2 Interaction And Apoptosis, Rachel Delston

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Local and Systemic Consequences of Reducing Notch Signaling in Skin Keratinocytes, Shadmehr Demehri

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Distinct Functions for Type I and Type II Interferon in Cancer Immunoediting, Mark Diamond

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Brain Insulin Action Regulates Hypothalamic Glucose Sensing and the Counterregulatory Response to Hypoglycemia, Kelly Diggs-Andrews

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Use-Dependent Plasticity Regulates Sleep Need in Drosophila Melanogaster, Jeffrey Donlea

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The Role of the ERK-MAPK Pathway and Stathmin in T Cell Development and Activation, Erin Lindsay Filbert

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Dact Family Molecules In Wnt Signaling In Mouse Development, Daniel Fisher

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Mitotic cell cycle progression and differentiation of germline stem cells in Caenorhabditis elegans, Paul Fox

Mechanism of Cytochrome c Biogenesis by the Integral Membrane System II Synthetase CcsBA, Elaine Roseanne Frawley

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Structural And Functional Studies On Thrombin Allostery, Prafull Gandhi

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Mechanisms of Copper-Dependent Notochord Formation in Zebrafish, John Gansner

Discovery and Characterization of Wu Polyomavirus, A Novel Virus Detected in Pediatric Respiratory Tract Infections, Anne Margaret Gaynor

Regulation of the Lytic Switch Gene 50 in Murine Gammaherpesvirus 68, Megan Marie Goodwin

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Inbreeding Depression and Competition in the square-stemmed monkey-flower (Mimulus ringens), Nicholas Griffin

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Roles Of Inhibitory Interneurons In Cerebellar Cortical Processing For Oculomotor Control, Shane Heiney

Lateral Inhibition Shapes Neuronal Selectivity for Natural Stimuli in Mouse Accessory Olfactory Bulb, Rebecca Hendrickson

Destruction of Cdc25A Phosphatase during Interphase and in Response to Genotoxic Stress, Yuchi Honaker

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A Search For Genetic Modifiers Responsible For Congenital Heart Disease Variability In The Presence Of Nkx2-5 Haploinsufficiency, Julia Brandeis Winston Honold

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Analysis of DNA-binding Proteins in Yeast Saccharomyces Cerevisiae, Su-Wen Ho

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The Role of Pax6 in Lens Placode Formation, Jie Huang

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Transcriptional Regulation of Zymogenic (Chief) Cell Differentiation and Maintenance in Adult Mouse Stomach, Won Jae Huh

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Genetic Analysis of the PI3K/AKT/mTOR Signaling Pathway, Janna Hutz

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Genetic and Phenotypic Differentiation between Winemaking and Wild Strains of Saccharomyces cerevisiae, Katie Hyma

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The convergence of PDF signaling and CRYPTOCHROME in the neuronal network underlying Drosophila circadian behavior, Seol Hee Im

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FCS Analysis of Pore Formation by the Human Protein Bax in Lipid Membranes, Olena Ivashyna

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The Function of Hedgehog Signaling in Embryonic and Postnatal Bone Development, Kyu Sang Joeng

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Mechanism of yeast prion portein aggregation and strain formation, Tejas Baba Kalastavadi

Catabolite Sensing Regulatory Pathways in Group A Streptococcus Control Virulence and Host-Pathogen Interactions, Colin Christopher Kietzman

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The role of the novel Drosophila gene Ema for endosomal maturation and autophagy, Sungsu Kim

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Novel Algorithms for Structural Alignment of Non-coding RNAs, Diana Kolbe

Transcriptional Regulation of Neuronal Differentiation in the Drosophila Central Nervous System, Haluk Lacin

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The Role of TCR Specificity in the Regulation of the Immune Response to Self and Commensal Antigens, Stephanie Lathrop

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Determination of the Structural and Functional Mechanisms of Perfluorocarbon-based Nanoemulsion Particle Interactions with Model Biomembrane Systems, Sun Joo Lee

Phylogenetic Illumination of Escherichia coli by Single Nucleotide Polymorphism Interrogation, Shana Leopold

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Role of Sua5 in tRNA modification and translational regulation, Changyi Adeline Lin

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LRP6 in Wnt Signaling and Breast Cancer Tumorigenesis, Chia-Chen Liu

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Mechanisms of Copper Deficiency in the Zebrafish Embryo, Erik Madsen

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Characterization Of Streptolysin O As The Translocator For The Cytolysin-Mediated Translocation Process In Streptococcus Pyogenes, N'Goundo Magassa

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Functional Genomic Examinations Of Interactions Between Common Members Of The Human Gut Microbiota, Michael Mahowald

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Unique Features of PTB RRMs: Insight into Protein Motions and RNA Binding, Caroline Maynard

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The Role of MDA5 and TLR3 in Response to dsRNA and Viral Infection, Stephen McCartney

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The Role of Actin Depolymerizing Factor in Regulating Actin Dynamics in Toxoplasma gondii, Simren Mehta

Advances in Fluorescence Correlation Spectroscopy with Applications to Studies of Macromolecular Interactions and Folding of RNA Hairpins, Artem Victorovich Melnykov

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The Impact Of Interferon Regulatory Factor 3 On The Immune Response To Herpes Simplex Virus Type I Infection, Vineet Menachery

Nutrtional Genetics during Zebrafish Development, Bryce Abram Mendelsohn

Small Nucleolar RNAs U32a, U33, and U35a Are Critical Mediators of Liptoxic and Oxidative Stress, Carlos Michel

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Assessing effects of symmetry on motif finding, lala Motlhabi

OmpA of Uropathogenic Escherichia coli Promotes Intracellular Pathogenesis, Resistance to Cathelicidin, and an IL-17/IL-23 Based Inflammatory Response Permissive for Persistent Infection, Tracy Felicia Nicholson

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The Genetic Architecture and Developmental Bases for Long Bone Length Quantitative Trait Loci in Mice, Elizabeth A. Norgard

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Mechanisms of Adult Neovascularization Nediated by Epithelial HIF-1 Activation, Sunday Samson Oladipupo

Elucidation of Nucleophosmin Translational Regulation, Mary Elizabeth Olanich

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An Examination of Oxysterol Effects on Membrane Bilayers Using Molecular Dynamics Simulations, Brett Olsen

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The Function and Regulation of Senescent Stromal-Derived Osteopontin, Ermira Pazolli

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Genetic Influences on Preterm Birth, Jevon Plunkett

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Characterization Of The Role For NMNAT, Kinase Cascades, And Purines In Axonal Degeneration, Craig Press

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The Role of the Clock Gene Bmal1 in Female Fertility and Parturition, Christine Ratajczak

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Phylogenetics and Phylogeography of Moray Eels (Muraenidae), Joshua Reece

The Role of SLP-76 in Osteoclast Function, Jennifer Lynn Reeve

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Presentation Of Citrullinated Peptides Derived From Unmodified Protein By Antigen Presenting Cells., Jamie Rimer

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Conservation Of The Intracellular Bacterial Community Pathogenic Pathway In Urinary Tract Infection, David Rosen

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Characterizing the Interaction of P. falciparum EBA-175 with its Receptor Glycophorin A, Nichole Salinas

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The Effects of Habitat Corridors and Edges on Sources of Seed Mortality: Implications for Restoring a Threatened Legume, Melissa Simon

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The Roles of MLL and Taspase1-Mediated MLL Proteolysis in Embryogenesis and the HGF-MET Signaling Pathway, Shugaku Takeda

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Examination of Molecular Recognition in Protein-Ligand Interactions, Yat Tang

Transient-State Kinetic Studies of Escherichia coli UvrD Monomer Translocation along Single-Stranded DNA, Eric J. Tomko

Control of Ribosomal RNA Genes by Maintenance and de novo Methylation in Arabidopsis thaliana: Molecular Genetics and Evoluation of the Pol IV/Pol V System, Sarah Lynn Tucker

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Investigation of Caspase-Independent Cell Death Pathways, Ho-Chou Tu

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The Role of Aerobic Glycolysis in the Resting Human Brain, Sanjeev Vaishnavi

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Role of Fibroblast Growth Factor Signaling in Epicardial Development and Function, Mónica Vega-Hernández

RNA Silencing Pathways and Ribosomal RNA Gene Inactivation in Arabidposis, Alexa P. Vitins

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Pacemaker Heterogeneity in the Suprachiasmatic Nucleus: Origins and Network Implications, Alexis Webb

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Proteomics Assisted Discovery Of Novel Proteins In Assembly And Regulation Of Photosystem II, Kimberly Wegener

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Cell Culture Models of Genetic Variation, Joshua T. Witten

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Transient-State Kinetic Studies of The Mechanisms of Dna Unwinding And Translocation of The E. Coli Recbc And Recbcd Helicases, Colin Wu

Theses/Dissertations from 2009

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Genomic Approaches for Pathway Identification in Regenerating Sensory Epithelia of the Inner Ear, David Alvarado

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Discovery Of Inactive E* Conformations In Thrombin And Other Vitamin K- Dependent Clotting Proteases, Alaji Bah

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The evolution and regulation of DNA-binding by the nickel-dependent transcription factor NikR, Erin Benanti

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Computational and Experimental Investigation of Allosteric Communication in the Transcriptional Regulator NikR, Michael Bradley

The Non-Coding RNA gadd7 is a Feed-Forward Regulator of Oxidative Stress, Rita Thomas Brookheart

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Integrated Genomics Of Susceptiblity To Therapy-Related Leukemia, Patrick Cahan

Immune Receptor Targeting by Orthopoxvirus MHC Class I-like Protein, Jessica Ann Campbell

Characterization of the Roles of Rab5 Isoforms in Endocytic Membrane Traffic and Cell Migration, Pin-I Chen