Research from 2024
Optimization of a Quantum Subset Sum Oracle
Angelo G. Benoit, Sam Schwartz, and Ron K. Cytron
Single-Molecule Orientation Imaging Reveals the Nano-Architecture of Amyloid Fibrils Undergoing Growth and Decay, Brian Sun, Tianben Ding, Weiyan Zhou, Tara S. Porter, and Matthew D. Lew
6D single-fluorogen orientation-localization microscopy for elucidating the architecture of beta-sheet assemblies and biomolecular condensates, Tingting Wu, Weiyan Zhou, Jai S. Rudra, Rohit V. Pappu, and Matthew D. Lew
Resolving the Nanoscale Structure of β-Sheet Peptide Self-Assemblies Using Single-Molecule Orientation–Localization Microscopy, Weiyan Zhou, Conor L. O'Neill, Tianben Ding, Oumeng Zhang, Jai S. Rudra, and Matthew D. Lew
Fundamental Limits in Measuring the Anisotropic Rotational Diffusion of Single Molecules, Weiyan Zhou, Tingting Wu, and Matthew D. Lew
Submissions from 2022
Six-dimensional single-molecule imaging with isotropic resolution using a multi-view reflector microscope, Oumeng Zhang, Zijian Guo, Yuanyuan He, Tingting Wu, Michael D. Vahey, and Matthew D. Lew
Resolving the Three-Dimensional Rotational and Translational Dynamics of Single Molecules Using Radially and Azimuthally Polarized Fluorescence, Oumeng Zhang, Weiyan Zhou, Jin Lu, Tingting Wu, and Matthew D. Lew
Submissions from 2021
Single-Molecule Localization Microscopy of 3D Orientation and Anisotropic Wobble Using a Polarized Vortex Point Spread Function, Tianben Ding and Matthew D. Lew
Data from Virtualized Hardware Logic Computations
Michael J. Hall, Roger Chamberlain, and Neil E. Olsen
Computational Modelling Enables Robust Multidimensional Nanoscopy, Matthew D. Lew
Adversarial Attack and Defense on Image Classification under Physical Constraints
Tong Wu
Computer Science and Engineering
Research from 2020
Elicitation and aggregation of data in knowledge intensive crowdsourcing
Dohoon Kim
Computer Science and Engineering
A Virtual 4D CT Scanner
Xiwen Li
Computer Science and Engineering
Centrality of Blockchain
Zixuan Li
Computer Science and Engineering
Single‐Molecule 3D Orientation Imaging Reveals Nanoscale Compositional Heterogeneity in Lipid Membranes, Jin Lu, Hesam Mazidi, Tianben Ding, Oumeng Zhang, and Matthew D. Lew
Measuring localization confidence for quantifying accuracy and heterogeneity in single-molecule super-resolution microscopy, Hesam Mazidi, Tianben Ding, Arye Nehorai, and Matthew D. Lew
The Effects of Mixed-Initiative Visualization Systems on Exploratory Data Analysis
Alvitta Ottley and Adam Kern
Nanoscale Colocalization of Fluorogenic Probes Reveals the Role of Oxygen Vacancies in the Photocatalytic Activity of Tungsten Oxide Nanowires, Meikun Shen, Tianben Ding, Steven T. Hartman, Fudong Wang, Christina Krucylak, Zheyu Wang, Che Tan, Bo Yin, Rohan Mishra, Matthew D. Lew, and Bryce Sadtler
A computationally-efficient bound for the variance of measuring the orientation of single molecules, Tingting Wu, Tianben Ding, Hesam Mazidi, Oumeng Zhang, and Matthew D. Lew
Solving disappearance at GASTech with visual analytic techniques
Saulet Yskak
Computer Science and Engineering
Research from 2019
A System for TA Checkouts
Benjamin Choi
Computer Science and Engineering
Static Taint Analysis of Binary Executables Using Architecture-Neutral Intermediate Representation
Elaine Cole
Computer Science and Engineering
Long-term, super-resolution imaging of amyloid structures using transient amyloid binding microscopy, Tianben Ding, Kevin Spehar, Jan Bieschke, and Matthew D. Lew
A Survey on the Role of Individual Differences on Visual Analytics Interactions: Masters Project Report
Jesse Huang and Alvitta Ottley
Computer Science and Engineering
Pipelined Parallelism in a Work-Stealing Scheduler
Thomas Kelly
Computer Science and Engineering
Feature Extraction form CT Scan of Plant Root
Chunyuan Li
Point Cloud Processing with Neural Networks
Stephanie Miller and Jiahao Li
Computer Science and Engineering
Challenges in Integrating IoT in Smart Home
Leiquan Pan and Chenyang Lu
Computer Science and Engineering
Smart Home Audio Assistant
Xipeng Wang
Computer Science and Engineering
Fundamental limits of measuring single-molecule rotational mobility, Oumeng Zhang and Matthew D. Lew
Erratum: "Imaging the three‐dimensional orientation and rotational mobility of fluorescent emitters using the Tri‐spot point spread function", Oumeng Zhang, Jin Lu, Tianben Ding, and Matthew D. Lew
Computational Geometry Teaching Tool
Yujie Zhou and Tao Ju
Submissions from 2018
A robust statistical estimation (RoSE) algorithm jointly recovers the 3D location and intensity of single molecules accurately and precisely, Hesam Mazidi, Arye Nehorai, and Matthew D. Lew
Super‐Resolution Imaging of Amyloid Structures over Extended Times by Using Transient Binding of Single Thioflavin T Molecules, Kevin Spehar, Tianben Ding, Yuanzi Sun, Niraja Kedia, Jin Lu, George R. Nahass, Matthew D. Lew, and Jan Bieschke
Measuring 3D molecular orientation and rotational mobility using a Tri-spot point spread function, Oumeng Zhang, Tianben Ding, Jin Lu, Hesam Mazidi, and Matthew D. Lew
Imaging the Three-Dimensional Orientation and Rotational Mobility of Fluorescent Emitters using the Tri-Spot Point Spread Function, Oumeng Zhang, Jin Lu, Tianben Ding, and Matthew D. Lew
Security Services Using Blockchains: A State of the Art Survey
Maeda Zolanvari, Aiman Erbad, Raj Jain, and Mohammed Samaka
Research from 2017
Decoupling Information and Connectivity in Information-Centric Networking
Hila Ben Abraham, Jyoti Parwatikar, John Dehart, Adam Drescher, and Patrick Crowley
Pricing and Bidding Strategies for Cloud Computing Spot Instances
Jiayi Song and Roch A. Guérin
Research from 2016
In-Network Retransmissions in Named Data Networking
Hila Ben Abraham and Patrick Crowley
MERCATOR (Mapping EnumeRATOR for CUDA) User's Manual
Stephen V. Cole and Jeremy Buhler
Multipath and Rate Stability
Junjie Liu and Roch A. Guérin
Locality-Aware Dynamic Task Graph Scheduling
Jordyn Maglalang, Sriram Krishnamoorthy, and Kunal Agrawal
Grafalgo - A Library of Graph Algorithms and Supporting Data Structures (revised)
Jonathan Turner
Research from 2015
WOODSTOCC: Extracting Latent Parallelism from a DNA Sequence Aligner on a GPU
Stephen V. Cole, Jacob R. Gardner, and Jeremy D. Buhler
Computer Science and Engineering
Faster Maximium Priority Matchings in Bipartite Graphs
Jonathan Turner
Grafalgo - A Library of Graph Algorithms and Supporting Data Structures
Jonathan Turner
Computer Science and Engineering
Maximum Priority Matchings
Jonathan Turner
The Bounded Edge Coloring Problem and Offline Crossbar Scheduling
Jonathan Turner
The Edge Group Coloring Problem with Applications to Multicast Switching
Jonathan Turner
Computer Science and Engineering
Maximizing Network Lifetime of Wireless Sensor-Actuator Networks under Graph Routing
Chengjie Wu, Dolvara Gunatilaka, Abusayeed Saifullah, Mo Sha, Paras Tiwari, Chenyang Lu, and Yixin Chen
Computer Science and Engineering
Conflict-Aware Real-Time Routing for Industrial Wireless Sensor-Actuator Networks
Chengjie Wu, Dolvara Gunatilaka, Mo Sha, and Chenyang Lu
Computer Science and Engineering
Research from 2014
Exploring User-Provided Connectivity
Mohammad H. Afrasiabi and Roch Guerin
Computer Science and Engineering
Data Transport System
Rahav Dor
Computer Science and Engineering
CloudPowerCap: Integrating Power Budget and Resource Management across a Virtualized Server Cluster
Yong Fu, Anne Holler, and Chenyang Lu
Computer Science and Engineering
Performance Modeling of Virtualized Custom Logic Computations
Michael J. Hall and Roger D. Chamberlain
Computer Science and Engineering
Federated Scheduling for Stochastic Parallel Real-time Tasks
Jing Li, Kunal Agrawal, Christopher Gill, and Chenyang Lu
Computer Science and Engineering
Capacity Augmentation Bound of Federated Scheduling for Parallel DAG Tasks
Jing Li, Abusayeed Saifullah, Kunal Agrawal, and Christopher Gill
Computer Science and Engineering
Migrating to IPv6 - The Role of Basic Coordination
Mehdi Nikkhah and Roch Guerin
Computer Science and Engineering
Inferring Memory Map Instructions
Paul T. Scheid, Ari J. Spilo, and Ron K. Cytron
Computer Science and Engineering
RT-OpenStack: a Real-Time Cloud Management System
Sisu Xi, Chong Li, Chenyang Lu, Christopher D. Gill, Meng Xu, Linh T.X. Phan, Insup Lee, and Oleg Sokolsky
Computer Science and Engineering
Research from 2013
Simple Analytic Performance Models for Streaming Data Applications Deployed on Diverse Architectures
Jonathan C. Beard, Roger D. Chamberlain, and Mark A. Franklin
Computer Science and Engineering
Kernel Density Metric Learning
Yujie He, Wenlin Chen, and Yixin Chen
Computer Science and Engineering
Adding Data Parallelism to Streaming Pipelines for Throughput Optimization
Peng Li, Kunal Agrawal, Jeremy Buhler, and Roger D. Chamberlain
Computer Science and Engineering
Efficient Parallel Real-Time Upsampling of Ultrasound Vectors
William D. Richard Ph.D.
Computer Science and Engineering
Parallel Real-Time Scheduling of DAGs
Abusayeed Saifullah, David Ferry, Jing Li, Kunal Agrawal, Chenyang Lu, and Christopher Gill
Computer Science and Engineering
Self-Adapting MAC Layer for Wireless Sensor Networks
Mo Sha, Meng Xu, Chenyang Lu, Linh T.X. Phan, Tae-Suk Kim, and Taerim Park
Computer Science and Engineering
Automated Color Calibration of Display Devices
Andrew Shulman
Computer Science and Engineering
EWA Model with Recency Effect and Limited Memory
Hang Xie
Computer Science and Engineering
Real-Time Multi-Core Virtual Machine Scheduling in Xen
Sisu Xi, Meng Xu, Chenyang Lu, Linh T.X. Phan, Christopher Gill, Olga Sokolsky, and Insup Lee
Computer Science and Engineering
Scanner: An Efficient and Accurate Trimming Tool for Illumina Next Generation Sequencing Reads
Xiang Zhou
Computer Science and Engineering
Research from 2012
Common DMA Engine Interface
Roger Alessi
Computer Science and Engineering
Kinect Hand Recognition and Tracking
Alex Drake
Computer Science and Engineering
Rapid Development Environments for Therapy Games: Looking Glass Therapy Games for Cerebral Palsy Treatment Utilizing the Kinect
Melynda Eden
Computer Science and Engineering
Implementation of Real-Time Calibration of Polarization Imaging Sensors
Collin Foster
Computer Science and Engineering
Just Draw It! A 3D Sketching System
Cindy Grimm and Pushkar Joshi
Computer Science and Engineering
Building a Skeleton of a Human Hand Using Microsoft Kinect
Jed Jackoway
Computer Science and Engineering
RIDE: A Mixed-Mode Control Interface for Mobile Robot Teams
Erik Karulf, Marshall Strother, Parker Dunton, and William D. Smart
Computer Science and Engineering
The Clear Channel Prior
Devorah Langsam
Computer Science and Engineering
Data collection and performance monitoring of real-time parallel systems
Mahesh Mahadevan
Computer Science and Engineering
A Memory Access Model for Highly-threaded Many-core Architectures
Lin Ma, Kunal Agrawal, and Roger D. Chamberlain
Computer Science and Engineering
An Integrated Data Mining Approach to Real-time Clinical Monitoring and Deterioration Warning
Yi Mao, Wenlin Chen, Yixin Chen, and Chenyang Lu
Computer Science and Engineering
A 3D Selection & Query Tool for the GeneAtlas Project
Donald McCurdy
Computer Science and Engineering
Youpon
Garrison Prinslow
Computer Science and Engineering
Self-Stabilization in the Distributed Systems of Finite State Machines
Abusayeed Saifullah
Computer Science and Engineering
Studying Network Optimization in the Context of Self-Stabilization
Abusayeed Saifullah
Computer Science and Engineering
Correction of an Augmentation Bound Analysis for Parallel Real-Time Tasks
Abusayeed Saifullah, Kunal Agrawal, Chenyang Lu, and Christopher Gill
Computer Science and Engineering
Real-Time Scheduling of Parallel Tasks under a General DAG Model
Abusayeed Saifullah, David Ferry, Chenyang Lu, and Christopher Gill
Computer Science and Engineering
Accounting for Failures in Delay Analysis for WirelessHART Networks
Abusayeed Saifullah, Paras Babu Tiwari, Bo Li, and Chenyang Lu lu@wustl.edu
Computer Science and Engineering
Foveon F13 Camera
David Shelley
Computer Science and Engineering
Specializing Interfaces for Citizen Science Segmentation of Volumetric Data
Michelle Vaughan, Cindy Grimm, Ruth Sowell, Robert Pless, and Stephen Kobourov
Computer Science and Engineering
Limitations and Solutions for Real-Time Local Inter-Domain Communication in Xen
Sisu Xi, Chong Li, Chenyang Lu, and Christopher Gill
Computer Science and Engineering
Early Warning System: Relay Sensor Deployment & Network Reliability Analysis
Zhicheng Yang
Computer Science and Engineering
Delaunay-restricted Optimal Triangulation of 3D Polygons
Ming Zou, Tao Ju, and Nathan Carr
Computer Science and Engineering
Research from 2011
Hierarchical Scheduling for Multicores with Multilevel Cache Hierarchies
Kunal Agrawal and Jim Sukha
Computer Science and Engineering
Generating Muscle Driven Arm Movements Using Reinforcement Learning
Alex S. Broad
Computer Science and Engineering
Mercury BLASTN Biosequence Similarity Search System: Technical Reference Guide
Jeremy Buhler
Computer Science and Engineering
Efficient Deadlock Avoidance for Streaming Computation with Filtering
Jeremy Buhler, Kunal Agrawal, Peng Li, and Roger D. Chamberlain
Computer Science and Engineering
Flux Balance Analysis of Dynamic Metabolism in Shewanella oneidensis MR-1 Using a Static Optimization Approach
Xueyang Feng, You Xu, Yixin Chen, and Yinjie Tang
Computer Science and Engineering
Feedback Thermal Control of Real-time Systems on Multicore Processors
Yong Fu, Nicholas Kottenstette, Chenyang Lu, and Xenofon D. Koutsoukos
Computer Science and Engineering