Title
Retrotransposons are the major contributors to the expansion of the Drosophila ananassae Muller F element
ResourceType
Dataset
DOI
https://doi.org/10.7936/K7B56HJQ
Grant/Award Number and Agency
Howard Hughes Medical Institute grant #52007051; National Science Foundation grant #1431407
Abstract
This file collection consists of the improved genomic sequences, gene annotations, and evidence tracks that were used by the analyses described in the manuscript “Retrotransposons are the major contributors to the expansion of the Drosophila ananassae Muller F element.” This study seeks to identify the factors that have contributed to the expansion of the D. ananassae F element (> 18.6Mb) compared to the D. melanogaster F element (~5.2 Mb). As part of this study, we performed manual sequence improvement and gene annotations of the D. ananassae F element and the base of the D element. The collection includes the D. ananassae gene annotations and additional notes in the Generic Feature Format Version 3 (GFF3) format. The collection also includes the MySQL database dump and the data files used to create the D. ananassae (Oct. 2015/DanaImproved) assembly on the GEP UCSC Genome Browser (available at http://gander.wustl.edu).
Language
en
Rights
http://creativecommons.org/licenses/by-sa/4.0/
Creative Commons License
This work is licensed under a Creative Commons Attribution 4.0 License.
Recommended Citation
Leung, Wilson; Elgin, Sarah C.R.; and http://gep.wustl.edu, "Retrotransposons are the major contributors to the expansion of the Drosophila ananassae Muller F element" (2017). Digital Research Materials (Data & Supplemental files). 5.
https://openscholarship.wustl.edu/data/5
Details on the files in this collection
Dananassae_paper_author_list_v2.xlsx (31 kB)
List of GEP faculty and students who contributed to the D. ananassae project
Open_scholarship_Digital_Research_Materials_5_revisions.docx (78 kB)
Publication Date
2017